This is a heavily interactive web application, and JavaScript is required. Simple HTML interfaces are possible, but that is not what this is.
Post
Constantin Pape
cppape.bsky.social
did:plc:wzg34kj5tkvcntsvqtvp6bky
Otherwise I would try ilastik pixel classification to segment foreground and boundaries of the chromosomes and then use these as the inputs for the interactive watershed. There is also the ilastik carving workflow, which could be used instead of interactive Fiji watershed.
2025-04-08T16:10:05.473Z