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Ragnar {Groot Koerkamp}
curiouscoding.nl
did:plc:olhpu3lwhpafue3jjmhat4mj
Turns out the 2020 'Minimally overlapping words' paper of Frith et al. already introduced this 'ABB' order where k-mers are small when they start with `A` and followed by as many non-A chars as possible. And also, this scheme has very close to optimal density for k<=w/6 1/2
https://doi.org/10.1093/bioinformatics/btaa1054
2025-02-17T13:13:40.052Z