Bioinformatics Developer | Metagenomics | scRNA-seq | Software Dev | Bioinformática @UFRN https://joao.bio.brhttps://bsky.app/profile/jvfe.bsky.socialhttps://bsky.app/profile/jvfe.bsky.social/post/3lrd7m6vit22eI'm happy to see that this collaboration with @juliaapolonio.bsky.social, which is part of her MSc's work, is finally out! Check out the paper if you're interested in conducting post-GWAS analyses with QTL data. [contains quote post or other embedded content]11 Jun 2025 10:36 +0000at://did:plc:6dore7hsvflncli56fis2rd3/app.bsky.feed.post/3lrd7m6vit22ehttps://bsky.app/profile/jvfe.bsky.social/post/3ld4xzfko5s2mThanks! Having Marcel as one of the examiners in my viva was instrumental to not only improving the written work, but also the software itself. Really glad he could follow the progress of this work throughout my MSc. [contains quote post or other embedded content]12 Dec 2024 19:12 +0000at://did:plc:6dore7hsvflncli56fis2rd3/app.bsky.feed.post/3ld4xzfko5s2mhttps://bsky.app/profile/jvfe.bsky.social/post/3lcfolvqfhs2nVery good blog post that highlights software dev skills you can acquire by developing Nextflow pipelines! I can attest to the same things discussed in the post - Nextflow really helped me better grasp key concepts like containerization and HPC schedulers. [contains quote post or other embedded content]03 Dec 2024 12:52 +0000at://did:plc:6dore7hsvflncli56fis2rd3/app.bsky.feed.post/3lcfolvqfhs2nhttps://bsky.app/profile/jvfe.bsky.social/post/3lc6vvj7nq223Really nice (and short!) paper that gives a good overview of the study of Y. pestis spread and plague pandemics using ancient DNA: https://doi.org/10.1016/j.tim.2024.10.008. It has a good set of references as well if you're like me and want to read more on the subject.30 Nov 2024 20:14 +0000at://did:plc:6dore7hsvflncli56fis2rd3/app.bsky.feed.post/3lc6vvj7nq223https://bsky.app/profile/jvfe.bsky.social/post/3lc3ga4peok2pHi BlueSky! I'm João, a bioinformatician based in Brazil. I'm working primarily with host-associated microbiome data and a lot of Nextflow. I enjoy talking about software development in academia (and how to best support it!), open source software, and, ofc, metagenomics. joao.bio.br 1/2 https://joao.bio.br/29 Nov 2024 10:56 +0000at://did:plc:6dore7hsvflncli56fis2rd3/app.bsky.feed.post/3lc3ga4peok2p