Postdoc at Dana-Farber and Harvard Med with Heng Li (@lh3lh3.bsky.social). Prev: UBC / UofT. I like thinking about biological sequence analysis and its applications to metagenomics / microbial genomics. https://jim-shaw-bluenote.github.iohttps://bsky.app/profile/jimshaw.bsky.socialhttps://bsky.app/profile/jimshaw.bsky.social/post/3mn3va5ybk22jOur method, savont, for generating amplicon sequence variants (ASVs) for long-read amplicons is now on bioRxiv. Work with @lh3lh3.bsky.social and help from @mkddueholm.bsky.social and team (Marie Riisgaard-Jensen, @kirk3gaard.bsky.social, Kasper Skytte Andersen) https://github.com/bluenote-1577/savont 1/6 [contains quote post or other embedded content]30 May 2026 20:28 +0000at://did:plc:irnc2rqp4oued7btjofpmke5/app.bsky.feed.post/3mn3va5ybk22jhttps://bsky.app/profile/jimshaw.bsky.social/post/3mmxgjvrexc2fExcited to speak at ASM Microbe 2026 in the Oxford Nanopore session about new tools for long-read metagenomics + 16S sequencing. If you're attending ASM Microbe June 4-7 in D.C. and want to chat, let me know! [contains quote post or other embedded content]29 May 2026 01:54 +0000at://did:plc:irnc2rqp4oued7btjofpmke5/app.bsky.feed.post/3mmxgjvrexc2f