Computational Systems Biology in Cancer Genomics. University of Miamihttps://bsky.app/profile/mceccarelli.bsky.socialhttps://bsky.app/profile/mceccarelli.bsky.social/post/3m3dnmj37f22whttps://www.sciencedirect.com/science/article/pii/S200103702500425816 Oct 2025 20:59 +0000at://did:plc:lasf237njmszpoth3llffb7u/app.bsky.feed.post/3m3dnmj37f22whttps://bsky.app/profile/mceccarelli.bsky.social/post/3m33htzyjjc23#TransposableElements and Homotypic Niches Drive Immune Dynamics and Resistance in #Melanoma Epigenetic-based #immunotherapy https://www.biorxiv.org/content/10.1101/2025.10.09.679175v113 Oct 2025 14:55 +0000at://did:plc:lasf237njmszpoth3llffb7u/app.bsky.feed.post/3m33htzyjjc23https://bsky.app/profile/mceccarelli.bsky.social/post/3lz4pws7j2k22Restraint of cancer cell plasticity by spatial homotypic clustering https://www.cell.com/cancer-cell/fulltext/S1535-6108(25)00366-618 Sep 2025 16:02 +0000at://did:plc:lasf237njmszpoth3llffb7u/app.bsky.feed.post/3lz4pws7j2k22https://bsky.app/profile/mceccarelli.bsky.social/post/3luic4qaqo22fIntegrated multi-omics profiling reveals the role of the DNA methylation landscape in shaping biological heterogeneity and clinical behaviour of metastatic melanoma. https://doi.org/10.1186/s13046-025-03474-921 Jul 2025 15:20 +0000at://did:plc:lasf237njmszpoth3llffb7u/app.bsky.feed.post/3luic4qaqo22fhttps://bsky.app/profile/mceccarelli.bsky.social/post/3llgqkiq4m22yrdcu.be/efuxT A detailed guide to assessing #genome-assembly based on #long-read sequencing data using Inspector. @natprot.bsky.social28 Mar 2025 11:47 +0000at://did:plc:lasf237njmszpoth3llffb7u/app.bsky.feed.post/3llgqkiq4m22yhttps://bsky.app/profile/mceccarelli.bsky.social/post/3lieh3dhwq22oComprehensive Profiling of Computational Techniques for Sequencing-Based HLA #ImmuneSignatures Extraction https://doi.org/10.1111/tan.7004917 Feb 2025 09:36 +0000at://did:plc:lasf237njmszpoth3llffb7u/app.bsky.feed.post/3lieh3dhwq22ohttps://bsky.app/profile/mceccarelli.bsky.social/post/3lhz2b4wduc2fIntegrated #multi-omics profiling reveals the role of the DNA methylation landscape in shaping biological heterogeneity and clinical behaviour of metastatic #melanoma https://www.biorxiv.org/content/10.1101/2025.02.07.637045v112 Feb 2025 20:47 +0000at://did:plc:lasf237njmszpoth3llffb7u/app.bsky.feed.post/3lhz2b4wduc2fhttps://bsky.app/profile/mceccarelli.bsky.social/post/3lggpidycr22jLeveraging #mRNA technology for antigen based #immuno-oncology therapies. https://doi.org/10.1136/jitc-2024-01056923 Jan 2025 20:21 +0000at://did:plc:lasf237njmszpoth3llffb7u/app.bsky.feed.post/3lggpidycr22j