Open Science Software Enthusiast - Director of Scientific Computing Software at HHMI Janeliahttps://bsky.app/profile/preibischs.bsky.socialhttps://bsky.app/profile/preibischs.bsky.social/post/3m2wc6zsm3s2hThe connectome of the entire male Drosophila central nervous system is out!! Acquired using FIB-SEM @ 8x8x8nm, we aligned 7.5 mio 2D images aligned into one seamless 3D volume, which was used to segment & proofread neurons and synapses. @hhmijanelia.bsky.social https://www.biorxiv.org/content/10.1101/2025.10.09.680999v111 Oct 2025 13:30 +0000at://did:plc:myv464ser2qdgdsqmkctxkai/app.bsky.feed.post/3m2wc6zsm3s2hhttps://bsky.app/profile/preibischs.bsky.social/post/3lq6cquxmwk2qThat only took 3.5 months 😅27 May 2025 18:24 +0000at://did:plc:myv464ser2qdgdsqmkctxkai/app.bsky.feed.post/3lq6cquxmwk2qhttps://bsky.app/profile/preibischs.bsky.social/post/3lpc2f5mq7223Looking forward! [contains quote post or other embedded content]16 May 2025 12:40 +0000at://did:plc:myv464ser2qdgdsqmkctxkai/app.bsky.feed.post/3lpc2f5mq7223https://bsky.app/profile/preibischs.bsky.social/post/3lo4fkiqpks2oFound some pretty cool books at the Marine Biological Laboratory @mblscience.bsky.social library alongside pictures of renowned stylish scientists, with @markkitti.bsky.social, @joshmoore.bsky.social and Graham Johnson. It was overall a very inspiring OME community meeting in Woods Hole!01 May 2025 13:19 +0000at://did:plc:myv464ser2qdgdsqmkctxkai/app.bsky.feed.post/3lo4fkiqpks2ohttps://bsky.app/profile/preibischs.bsky.social/post/3lnfzhh3gr22kThe STIM paper is out! We build on established computer vision techniques to automatically create 3D volumes of spatial transcriptomics datasets with human-level accuracy, and useful, interactive visualizations. https://www.sciencedirect.com/science/article/pii/S2405471225000973 @hhmijanelia.bsky.social @mdc-bimsb.bsky.social22 Apr 2025 15:44 +0000at://did:plc:myv464ser2qdgdsqmkctxkai/app.bsky.feed.post/3lnfzhh3gr22khttps://bsky.app/profile/preibischs.bsky.social/post/3lm36wupf6c2gShout out to my dear #BigStitcher #Windows users :) I finally got access to a Windows VM and fixed many Windows bugs. I hope most functionality is restored. I still advise switching to Linux/Mac, but I will be able to provide more Windows support in the future if necessary.05 Apr 2025 14:57 +0000at://did:plc:myv464ser2qdgdsqmkctxkai/app.bsky.feed.post/3lm36wupf6c2ghttps://bsky.app/profile/preibischs.bsky.social/post/3llyb33thqc2bI recently visited #Amazon HQ2, to present at the AWS Imagine Nonprofit conference 2025. It was exciting to see use cases & opinions from other areas than biomedicine, to make new contacts, and to see how people at AWS work. #AWS has an interesting line up of #conferences & #funding opportunities:04 Apr 2025 10:57 +0000at://did:plc:myv464ser2qdgdsqmkctxkai/app.bsky.feed.post/3llyb33thqc2bhttps://bsky.app/profile/preibischs.bsky.social/post/3lk7ecsdqzs2lPretty awesome setting for today’s workshop on enabling access to emerging bioimaging techniques organized by Ian Dobbie at JHU’s downtown DC campus. We had great presentations and discussions; https://sites.krieger.jhu.edu/iic/workshop-on-enabling-access-to-emerging-bioimaging-techniques/12 Mar 2025 19:54 +0000at://did:plc:myv464ser2qdgdsqmkctxkai/app.bsky.feed.post/3lk7ecsdqzs2lhttps://bsky.app/profile/preibischs.bsky.social/post/3ljqolidalc25Stephan (@herrsaalfeld.bsky.social) of @hhmijanelia.bsky.social explains to the interested Ashburn community how AI can help us understanding biological systems at Old Ox Brewery 😎06 Mar 2025 23:48 +0000at://did:plc:myv464ser2qdgdsqmkctxkai/app.bsky.feed.post/3ljqolidalc25