Postdoc researcher in bioinformatics at Pasteur institute. Scalable methods and software for metagenomics. https://github.com/GaetanBenoitDevhttps://bsky.app/profile/gaetanbenoit.bsky.socialhttps://bsky.app/profile/gaetanbenoit.bsky.social/post/3mlkxmjnlzk2jNote that I released a new version of metaMDBG (v1.4) last week focusing on scalability. You can now process such dataset in 6 days and 130 GB of memory [contains quote post or other embedded content]11 May 2026 09:30 +0000at://did:plc:pc3b47ip77kd3ymgzdnbih27/app.bsky.feed.post/3mlkxmjnlzk2jhttps://bsky.app/profile/gaetanbenoit.bsky.social/post/3mjwryvsib22mI was investigating the genomes that I didn't manage to convert to near-complete MAGs in my assembly graph (the components in gray). The circle on top left is actually a complete genome but with 40% completeness (both in metaMDBG and myloasm)20 Apr 2026 15:31 +0000at://did:plc:pc3b47ip77kd3ymgzdnbih27/app.bsky.feed.post/3mjwryvsib22m