Data Science Research Assistant at LIBD https://manishabarse.github.io/ #bioinformatics #Rstats @libdrstats.bsky.social @lieberinstitute.bsky.social @Bioconductor.bsky.social/🧠 genomics @lcolladotor.bsky.social https://bsky.app/profile/mbarse.bsky.socialhttps://bsky.app/profile/mbarse.bsky.social/post/3m7az2n5yt22yHi! Check out my #RStats session on #R ’s object systems at @libdrstats.bsky.social - classes, objects, methods, & how all this drives our #bioinformatics workflows. Niche? Yes. But fascinating!⚙️🔧🧠✨ 🎥 youtu.be/EEqIJaDIb1I 🛝 https://speakerdeck.com/manishabarse/oop-in-r-understanding-s3-and-s4-systems @lieberinstitute.bsky.social #OOP #S3 #S4 https://youtu.be/EEqIJaDIb1I05 Dec 2025 17:27 +0000at://did:plc:v776v3myqwukex76bmiivcup/app.bsky.feed.post/3m7az2n5yt22yhttps://bsky.app/profile/mbarse.bsky.social/post/3lxujxfrtp22kHi everyone! Check my journal club talk on the latest review paper: Cell-type deconvolution methods for spatial transcriptomics 🧬 🎥 https://www.youtube.com/watch?v=xDjFJRGp56o 🛝 speakerdeck.com/manishabarse @lieberinstitute.bsky.social #Bioinformatics #SpatialTranscriptomics #Cell-TypeDeconvolution02 Sep 2025 16:28 +0000at://did:plc:v776v3myqwukex76bmiivcup/app.bsky.feed.post/3lxujxfrtp22khttps://bsky.app/profile/mbarse.bsky.social/post/3lqxovzf6xk2lHi everyone! Check my beginner-friendly #RStats talk at @lieberinstitute.bsky.social on reshaping, joining, binding, & set ops- all #tidyverse way! Shared simple demo to handle data better! 🎥 youtu.be/5L133h_1SNo 🛝 https://speakerdeck.com/manishabarse/reshaping-data-and-joining-tables @libdrstats.bsky.social #DataWrangling #DataScience https://youtu.be/5L133h_1SNo06 Jun 2025 20:38 +0000at://did:plc:v776v3myqwukex76bmiivcup/app.bsky.feed.post/3lqxovzf6xk2lhttps://bsky.app/profile/mbarse.bsky.social/post/3lpu3iwgks22fPresented at @lieberinstitute.bsky.social #RStats club on pseudobulk analysis using pseudoBulkDGE()📊 A handy wrapper for DE analysis following OSCA guidelines-shared a demo & walked through the method!✨ 🎥 youtu.be/0OkWBLyLrfg 🛝 https://speakerdeck.com/manishabarse/pseudobulk-analysis-using-pseudobulkdge @libdrstats.bsky.social #Bioinformatics https://www.youtube.com/watch?v=0OkWBLyLrfg&t=1442s23 May 2025 16:48 +0000at://did:plc:v776v3myqwukex76bmiivcup/app.bsky.feed.post/3lpu3iwgks22fhttps://bsky.app/profile/mbarse.bsky.social/post/3lps3ygzicc2aHi! Check my journal club talk: smart ML method to deconvolute pooled snRNA-seq using sex-specific expression🧬 Thanks @daylab.bsky.social & @rphillips3.bsky.social for this approach🙌 🎥 youtu.be/zpeCFwYfV3o 🛝 speakerdeck.com/manishabarse #snRNAseq #ML #Bioinformatics @lieberinstitute.bsky.social https://youtu.be/zpeCFwYfV3o22 May 2025 21:51 +0000at://did:plc:v776v3myqwukex76bmiivcup/app.bsky.feed.post/3lps3ygzicc2ahttps://bsky.app/profile/mbarse.bsky.social/post/3layocf6ppk2uHi Bluesky! 👋 I'm new here and excited to share that I recently gave my first presentation for the #RStats club! I talked about the metrics summary CSV files generated by SpaceRanger for #Visium spatial transcriptomics. Looking forward to connecting and learning together! 🌟 [contains quote post or other embedded content]15 Nov 2024 15:17 +0000at://did:plc:v776v3myqwukex76bmiivcup/app.bsky.feed.post/3layocf6ppk2u